Good stuff above.
By the way, for those who wondered about the smallness of the shots: when you click one of the shots to go into the "viewing" mode you can click it again to get a larger size view.
To the OP -- basically, the shots where you had stable defined subject came out fine, especially the battery shots because they were big enough and detailed enough so that your camera had no problem locking on, the first bullet came out nice, I'd even say the lizard came out nice because it had detail, especially the head shot.
But as was said above, the AF sensor can be thrown off when there are conflicting areas of contrast/detail. That does happen. For example with both of the bee shots, well, where was the camera supposed to focus? The focus point wasn't centered on the bee in either shot but instead was looking at some low-contrast flowery stuff, so in those shots the focus sensor just did its best to find something, which obviously wasn't the bee!
With the fly on the bullet, again, your point was not centered on the fly, the focus sensor "looked" for something and found the bullet tip. The fly was just to small and light, low contrast, to "grab" the sensor.
These say to me that all you need is practice! And practice and practice and practice, learning to work with the AF and to give it the "stuff" it needs to work for you. That center AF point is actually very good and accurate, but as you can see in those shots if it's not given a good "target" by you, well, the results will be hit-or-miss and disappointing.
Did I say practice? That is so crucial when you are "chasing" the critters -- get as close as you can, keep your eye glued to the viewfinder, and learn to work that AF and to spot the operation of the AF, especially that "moment" when it "grabs" something, and the 5D viewfinder is big enough that you really can see the grab, and you can see if it misses your intended subject!
Oh, and practise!