I would hope that Sigma would step up to the plate for this, its the least they can do Customer Service wise.
Ironically, Canon used to ask the same thing; I asked the person on the phone which of my three bodies they wanted to adjust the lens for and what would that do to the others. There was silence, so I suggested; "have the tech work really hard at getting the focus into the middle of the tolerance range, then I'll deal with the bodies."
That's the same request I make when I send a body in for cleaning and recalibration. "Set the focus to the middle of the spec.
I've noticed, with my 5DIIs that when they did the recalibration it did make the micro adjustments less severe. Also, the focus on two 5Dcs was a bit more precise.
Wonder if it helps that I'm a paying member of CPS? 