I ran some more tests today on the loaner 17-55mm lens that Canon Service provided. I used a tripod, AF center point, IS off, OneShot, ISO 100, and shot at focal lengths of 35mm or 55mm. Here's what I found.
On my 7D2, 15 blurry shots, 4 slightly blurry, 7 sharp. That's 73% failures.
In Live View, I obtained 4 out of 4 sharp results.
I also shot some tests on my SL1 body, same conditions as above. Results were
No blurry shots, 1 slightly blurry, 13 sharp. Only 7% failures.
Also 2 sharp shots in Live View.
All the blurry shots were severely front-focused.
When shooting, I get quick apparent focus lock, a confirming beep, and green AF dot in the viewfinder. The subject looks sharp. The distance scale of the lens does not move when the shutter is released. Everything seems fine while shooting. There is no indication at all of a problem. However, the problem is obvious when chimping and when viewing the results on the computer.
At a zoom of 55mm, most of the results were sharp. At 35mm, most were bad.
When comparing AF and Live View, I noticed that the focus usually shifts slightly and sometimes significantly when going from Live View to AF. I don't know if this means anything.
Like I said, I'm baffled.
Here is an example from today, comparing at 100%. I guess it should be obvious, but AF is on the left and LV manual focus on the right. Straight out of the camera.

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